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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 41758

Assessing large landscape patterns of potential fire connectivity using circuit methods

ContextMinimizing negative impacts of wildfire is a major societal objective in fire-prone landscapes. Models of fire connectivity can aid in understanding and managing wildfires by analyzing potential fire spread and conductance patterns. We define ‘fire connectivity’ as the landscape’s capacity to facilitate fire transmission from one point on the landscape to another.ObjectivesOur objective was
Authors
Erin K. Buchholtz, Jason R. Kreitler, Douglas J. Shinneman, Michele R. Crist, Julie A. Heinrichs

Paired Air and Stream Temperature Analysis (PASTA) to evaluate groundwater influence on streams

Groundwater is critical for maintaining stream baseflow and thermal stability; however, the influence of groundwater on streamflow has been difficult to evaluate at broad spatial scales. Techniques such as baseflow separation necessitate streamflow records and do not directly indicate whether groundwater inflow may be sourced from more dynamic shallow flowpaths. We present a web tool application P
Authors
Danielle K. Hare, Susanne A. Benz, Barret L. Kurylyk, Zachary Johnson, Neil Terry, Ashley M. Helton

Environmental factors influencing detection efficiency of an acoustic telemetry array and consequences for data interpretation

BackgroundAcoustic telemetry is a commonly used technology to monitor animal occupancy and infer movement in aquatic environments. The information that acoustic telemetry provides is vital for spatial planning and management decisions concerning aquatic and coastal environments by characterizing behaviors and habitats such as spawning aggregations, migrations, corridors, and nurseries, among other
Authors
Michael Long, Adrian Jordaan, Theodore R. Castro-Santos

Lake Ontario August gillnet survey and Lake Trout assessment, 2022

Lake Ontario Lake Trout (Salvelinus namaycush) rehabilitation has been annually assessed with fishery independent surveys since 1983, in an effort to evaluate program benchmarks and compare observations with management objectives. These surveys provide information on the abundance, strain composition, and condition of the adult Lake Trout stock, as well as information on levels of natural recruitm
Authors
Brian O'Malley, Brian F. Lantry, Scott P. Minihkeim, James Duncan Mckenna, Jessica A. Goretzke, Alexander J. Gatch, Dimitry Gorsky

Observed and projected functional reorganization of riverine fish assemblages from global change

Climate and land-use/land-cover change (‘global change’) are restructuring biodiversity, globally. Broadly, environmental conditions are expected to become warmer, potentially drier (particularly in arid regions), and more anthropogenically developed in the future, with spatiotemporally complex effects on ecological communities. We used functional traits to inform Chesapeake Bay Watershed fish res
Authors
Taylor E Woods, Mary Freeman, Kevin P. Krause, Kelly O. Maloney

Assessment of three methods to evaluate the distribution of submersed aquatic vegetation in western Lake Erie

Submersed aquatic vegetation (SAV) plays an important role in ecosystems. Inventories of SAV spatial distribution and composition are important for monitoring changes in SAV. In this study, we compared three common SAV sampling methods to quantify SAV in western Lake Erie. Aerial imagery of near-shore areas in western Lake Erie was classified using object-based image analysis (OBIA) and evaluated
Authors
Nicole R. King, Jenny L. Hanson, Travis J. Harrison, Patrick M. Kočovský, Christine M. Mayer

Nocturnal basking in freshwater turtles: A global assessment

Diurnal basking (“sunning”) is common in many ectotherms and is generally thought to be a behavioural mechanism for thermoregulation. Recent studies have reported the occurrence of nocturnal basking in a few distantly-related species of freshwater turtles, but the true extent of this behaviour is unknown, and it may be underreported due to sampling biases (e.g., not surveying for turtles at night)
Authors
Donald T. McKnight, Kendall Ard, Renoir J. Auguste, Gaurav Barhadiya, Michael F. Benard, Paige Boban, Martin L. Dillon, Colleen T. Downs, Brett Alexander DeGregorio, Brad Glorioso, Rachel M. Goodman, Coen Hird, Ethan C. Hollender, Malcolm Kennedy, Rosie A. Kidman, Andrhea Massey, Pearson McGovern, Max Mühlenhaupt, Kayhan Ostovar, Danusia Podgorski, Cormac Price, Beth A. Reinke, Louise M. Streeting, Jane Venezia, Jeanne Young, Eric J. Nordberg

Does coat colour influence survival? A test in a cyclic population of snowshoe hares

Some mammal species inhabiting high-latitude biomes have evolved a seasonal moulting pattern that improves camouflage via white coats in winter and brown coats in summer. In many high-latitude and high-altitude areas, the duration and depth of snow cover has been substantially reduced in the last five decades. This reduction in depth and duration of snow cover may create a mismatch between coat co
Authors
Madan K. Oli, Alice J Kenny, Rudy Boonstra, Stan Boutin, Dennis L. Murray, Michael J.L. Peers, B. Scott Gilbert, Thomas S. Jung, Vratika Chaudhary, James E. Hines, Charles J Krebs

Energy-related wastewater contamination alters microbial communities of sediment, water, and amphibian skin

To inform responsible energy development, it is important to understand the ecological effects of contamination events. Wastewaters, a common byproduct of oil and gas extraction, often contain high concentrations of sodium chloride (NaCl) and heavy metals (e.g., strontium and vanadium). These constituents can negatively affect aquatic organisms, but there is scarce information for how wastewaters
Authors
Brian J. Tornabene, Kelly L. Smalling, Carrie E Givens, Emily Bea Oja, Blake R. Hossack

22 years of aquatic plant spatiotemporal dynamics in the upper Mississippi River

Macrophyte (aquatic plant) recovery has occurred in rivers worldwide, but assemblage patterns and habitat requirements are generally not well understood. We examined patterns of species composition and macrophyte abundance in the Upper Mississippi River (UMR), spanning 22 years of monitoring and a period of vegetation recovery. Non-metric multidimensional scaling (NMDS) ordination revealed a gradi
Authors
Alicia Carhart, Jason J. Rohweder, Danelle M. Larson

Population dynamics and harvest management of eastern mallards

Managing sustainable harvest of wildlife populations requires regular collection of demographic data and robust estimates of demographic parameters. Estimates can then be used to develop a harvest strategy to guide decision-making. Mallards (Anas platyrhynchos) are an important species in the Atlantic Flyway for many users and they exhibited exponential growth in the eastern United States between
Authors
Anthony J. Roberts, Jeffrey A. Hostetler, Joshua C. Stiller, Patrick K. Devers, William Link

The NEON Ecological Forecasting Challenge

The 21st century continues to be characterized by major changes to the environment and the ecosystem services upon which society depends. Anticipating and responding to these changes requires that scientists explicitly forecast future conditions in real time (Dietze et al. 2018). Ecological forecasting, like weather and epidemiological forecasting, involves integrating data and models to generate 
Authors
R. Quinn Thomas, Carl Boettiger, Cayelan C. Carey, Michael Dietze, Leah R. Johnson, Melissa A. Kenney, Jason S. McLachlan, Jody A. Peters, Eric R. Sokol, Jake Weltzin, Alyssa Willson, Whitney M. Woelmer