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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 41778

Reevaluation of the role of blocked Oropsylla hirsuta prairie dog fleas (Siphonaptera: Ceratophyllidae) in Yersinia pestis (Enterobacterales: Enterobacteriaceae) transmission

Prairie dogs in the western United States experience periodic epizootics of plague, caused by the flea-borne bacterial pathogen Yersinia pestis. An early study indicated that Oropsylla hirsuta (Baker), often the most abundant prairie dog flea vector of plague, seldom transmits Y. pestis by the classic blocked flea mechanism. More recently, an alternative early-phase mode of transmission has been p
Authors
Adélaïde Miarinjara, David A. Eads, David M. Bland, Marc R. Matchett, Dean E. Biggins, B. Joseph Hinnebusch

Environmental filtering controls soil biodiversity in wet tropical ecosystems

The environmental factors controlling soil biodiversity along resource gradients remain poorly understood in wet tropical ecosystems. Aboveground biodiversity is expected to be driven by changes in nutrient availability in these ecosystems, however, much less is known about the importance of nutrient availability in driving soil biodiversity. Here, we combined a cross-continental soil survey acros
Authors
Haiying Cui, Peter M. Vitousek, Sasha C. Reed, Wei Sun, Blessing Sokoya, Adebola R. Bamigboye, Jay Prakash Verma, Arpan Mukherjee, Gabriel F. Peñaloza-Bojacá, Alberto L. Teixido, Pankaj Trivedi, Ji-Zheng He, Hang-Wei Hu, Kenny Png, Manuel Delgado-Baquerizo

Modeling the impact of invasive species litter on conditions affecting its spread and potential regime shift

Many introduced plants pose invasion risks globally and threaten the biodiversity of native ecosystems. Such non-native plants can become invasive when they have advantages over native plants, such as having fewer natural enemies. Invasive plants often have the ability to alter ecosystem properties after they have become established, which can make it difficult to eliminate the invasive. In princi
Authors
Yuanming Lu, Donald L. DeAngelis, Junfei Xia, Jiang Jiang

Space use and site fidelity of wintering whooping cranes on the Texas Gulf Coast

The Aransas-Wood Buffalo population (the only non-reintroduced, migratory population) of endangered whooping cranes (Grus americana) overwinters along the Texas Gulf Coast, USA. Understanding whooping crane space use on the wintering grounds reveals essential aspects of this species' ecology, which subsequently assists with conservation. Using global positioning system telemetry data from marked w
Authors
Matthew J Butler, David R. Stewart, Grant M Harris, Mark T. Bidwell, Aaron T. Pearse

Avian-associated Aspergillus fumigatus displays broad phylogenetic distribution, no evidence for host specificity, and multiple genotypes within epizootic events

Birds are highly susceptible to aspergillosis, which can manifest as a primary infection in both domestic and wild birds. Aspergillosis in wild birds causes mortalities ranging in scale from single animals to large-scale epizootic events. However, pathogenicity factors associated with aspergillosis in wild birds have not been examined. Specifically, it is unknown whether wild bird-infecting strain
Authors
Lotus A. Lofgren, Jeffrey M. Lorch, Robert A. Cramer, David S. Blehert, Brenda M. Berlowski-Zier, Megan Winzeler, Cecilia Gutierrez-Perez, Nicole E. Kordana, Jason E. Stajich

A Resist-Accept-Direct decision-support tool for walleye Sander vitreus (Mitchill) management in Wisconsin

Large-scale modelling and prediction provide insight into general influences of climate change on inland recreational fisheries; however, small-scale dynamics and local expertise will be key in developing explicit goals for managing recreational fisheries as the climate changes. The resist-accept-direct (RAD) framework encompasses the entire decision space managers consider when addressing climate
Authors
Colin J. Dassow, Alex W. Latzka, Abigail Lynch, Greg G. Sass, Ralph W. Tingley, Craig Paukert

Population reproductive structure of Rainbow Trout determined by histology and advancing methods to assign sex and assess spawning capability

Rainbow Trout Oncorhynchus mykiss have been intensively studied and gametogenesis has been described, but the use of reproductive indices in field studies has not been widely applied when assessing variability in growth or recruitment dynamics. We integrated descriptions for gametogenesis within the framework of standardized terminology for reproductive development in teleosts to develop sex-speci
Authors
James A. Crossman, Molly A. H. Webb, Josh Korman, Michael D. Yard

Precision and bias of spatial capture–recapture estimates: A multi-site, multi-year Utah black bear case study

Spatial capture–recapture (SCR) models are powerful analytical tools that have become the standard for estimating abundance and density of wild animal populations. When sampling populations to implement SCR, the number of unique individuals detected, total recaptures, and unique spatial relocations can be highly variable. These sample sizes influence the precision and accuracy of model parameter e
Authors
Greta M Schmidt, Tabitha Graves, Jordan C Pederson, Sarah L Carroll

Evaluating temporal and spatial transferability of a tidal inundation model for foraging waterbirds

For ecosystem models to be applicable outside their context of development, temporal and spatial transferability must be demonstrated. This presents a challenge for modeling intertidal ecosystems where spatiotemporal variation arises at multiple scales. Models specializing in tidal dynamics are generally inhibited from having wider ecological applications by coarse spatiotemporal resolution or hig
Authors
Marisa T. Martinez, Leonardo Calle, Stephanie Romanach, Dale E. Gawlik

RestoreNet: Collaboration to improve success of seed-based restoration on the Colorado Plateau

Dryland restoration faces challenges from heat, drought, and unpredictable rainfall, that are increasingly common and severe due to climate change. Land managers need information about successful seed-based restoration techniques and seed mixes that are not widely available to increase restoration success. Researchers from the US Geological Survey (USGS) and partner universities are working with l
Authors
Seth M. Munson, Molly L. McCormick, M. Scott, Ariel Leger

Gene pool boundaries for the Yosemite toad (Anaxyrus canorus) reveal asymmetrical migration within meadow neighborhoods

The Yosemite toad (Anaxyrus [Bufo] canorus) is a federally threatened species of meadow-specializing amphibian endemic to the high-elevation Sierra Nevada Mountains of California. The species is one of the first amphibians to undergo a large demographic collapse that was well-documented, and is reputed to remain in low abundance throughout its range. Recent phylogeographic work has demonstrated th
Authors
Paul A. Maier, A. G. Vandergast, Steven M. Ostoja, Andres Aguilar, Andrew J. Bohonak