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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 41764

Considering pollinators' ecosystem services in the remediation and restoration of contaminated lands: Overview of research and its gaps

The concept of ecosystem services provides a useful framework for understanding how people are affected by changes to the natural environment, such as when a contaminant is introduced (e.g., oil spills, hazardous substance releases) or, conversely, when contaminated lands are remediated and restored. Pollination is one example of an important ecosystem service; pollinators play a critical role in
Authors
James Meldrum, Diane L. Larson, Timothy B. Hoelzle, Jo Ellen Hinck

Apparent discrepancies in the review “Avian host range of Chlamydophila spp. based on isolation, antigen detection and serology” by Kaleta, E.F. & Taday, E.M.A. (2003), Avian Pathology, 32, 435–462

Citing published reports and their own diagnostic data, Kaleta and Taday (Citation2003) (https://doi.org/10.1080/03079450310001593613) reported that 469 domestic and free-living bird species were determined to be chlamydia-positive, based on isolation of the organism and antigen detection or on serological detection of circulating antibodies. However, I was unable to reconcile the designation of c
Authors
J. Christian Franson

Wildfire immediately reduces nest and adult survival of greater sage-grouse

Wildfire events are becoming more frequent and severe on a global scale. Rising temperatures, prolonged drought, and the presence of pyrophytic invasive grasses are contributing to the degradation of native vegetation communities. Within the Great Basin region of the western U.S., increasing wildfire frequency is transforming the ecosystem toward a higher degree of homogeneity, one dominated by in
Authors
Emily (Emmy) A Tyrrell, Peter S. Coates, Brian G. Prochazka, Brianne E. Brussee, Shawn P. Espinosa, Joshua M. Hull

Changes in abiotic drivers of green sea urchin demographics following the loss of a keystone predator

Sea urchin population demographics can respond to changes in keystone species abundances, with the magnitude of these responses varying depending on environmental influences. In this study, sea urchin populations were surveyed across 15 Aleutian archipelago islands over a 30-year period to understand how patterns of sea urchin demography (density, biomass, and size structure) varied through differ
Authors
Ben P. Weitzman, B. Konar, M. S. Edwards, D. B. Rasher, Michael C. Kenner, M. T. Tinker, J. A. Estes

Supporting the development and use of native plant materials for restoration on the Colorado Plateau (Fiscal Year 2022 Report)

A primary focus of the Colorado Plateau Native Plant Program (CPNPP) is to identify and develop appropriate native plant materials (NPMs) for current and future restoration projects. Multiple efforts have characterized the myriad challenges inherent in providing appropriate seed resources to enable effective, widespread restoration and have identified a broad suite of research activities to provid
Authors
Robert Massatti, Daniel E. Winkler, Sasha C. Reed, Michael C. Duniway, Seth M. Munson, John B. Bradford

Storms and pH of dam releases affect downstream phosphorus cycling in an arid regulated river

Reservoirs often bury phosphorus (P), leading to seasonal or persistent reductions in P supply to downstream rivers. Here we ask if observed variation in the chemistry of dam release waters stimulates downstream sediment P release and biological activity in an arid, oligotrophic system, the Colorado River below Lake Powell, Arizona, USA. We use bottle incubations to simulate a range of observed pH
Authors
Bridget Deemer, Robin H. Reibold, Anna Fatta, Jessica R. Corman, Charles Yackulic, Sasha C. Reed

White perch health relative to urbanization and habitat degradation in Chesapeake Bay tributaries. II. Hepatic and splenic macrophage aggregates

Macrophage aggregate (MA) abundance in fish is a useful general biomarker of contaminant exposures and environmental stress. Hepatic and splenic MAs were evaluated in semi-anadromous white perch Morone americana (Gmelin, 1789) from the urbanized Severn River (S) and the more rural Choptank River (C), Chesapeake Bay. Fish were collected from different sites in the annual migratory circuit in each r
Authors
Vicki S. Blazer, Mark A Matsche, Erin L. Pulster

White perch health relative to urbanization and habitat degradation in Chesapeake Bay tributaries. I. Biliary neoplasms and hepatic lesions

White perch Morone americana (Gmelin, 1789) from the Chesapeake Bay (USA) watershed have a high incidence of liver disease, including neoplasms of bile duct origin. Fish collected seasonally from spring 2019 to winter 2020 from the urban Severn River and the more rural Choptank River were evaluated for hepatic lesions. Biliary hyperplasia (64.1%), neoplasms (cholangioma and cholangiocarcinoma, 27%
Authors
Vicki S. Blazer, Mark A Matsche, Erin L. Pulster

Evolution of a minimal cell

Possessing only essential genes, a minimal cell can reveal mechanisms and processes that are critical for the persistence and stability of life1,2. Here we report on how an engineered minimal cell3,4 contends with the forces of evolution compared with the Mycoplasma mycoides non-minimal cell from which it was synthetically derived. Mutation rates were the highest among all reported bacteria, but w
Authors
Roy Z. Moger-Reischer, John I. Glass, Kim S. Wise, Lijie Sun, Daniela M.C. Bittencourt, Brent K. Lehmkuhl, Donald Schoolmaster, Michael Lynch, Jay T. Lennon

SARS-CoV-2 utilization of ACE2 from different bat species allows for virus entry and replication in vitro

Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is believed to have a zoonotic origin with bats suspected as a natural host. In this work, we individually express the ACE2 of seven bat species including, little brown, great roundleaf, Pearson's horseshoe, greater horseshoe, Brazilian free-tailed, Egyptian rousette, and Chinese rufous horseshoe in DF1 cells and determine their ability
Authors
Kelsey Briggs, Ryan Sweeney, David S. Blehert, Erica Spackman, David L. Suarez, Darrel Kapczynski

Identifying invertebrate indicators for streamflow duration assessments in forested headwater streams

Streamflow-duration assessment methods (SDAMs) are rapid, indicator-based tools for classifying streamflow duration (e.g., intermittent vs perennial flow) at the reach scale. Indicators are easily assessed stream properties used as surrogates of flow duration, which is too resource intensive to measure directly for many reaches. Invertebrates are commonly used as SDAM indicators because many are n
Authors
Ken M. Fritz, Roxolana O. Kashuba, Gregory J. Pond, Jay R. Christensen, Laurie C. Alexander, Benjamin J. Washington, Brent R. Johnson, David Walters, William T. Thoeny, Paul C. Weaver

Estimating proximity effects to wildfire fuels treatments on house prices in Cibola National Forest, New Mexico, USA

Forested landscapes in the Western United States are subject to growing size and severity of wildfires, in part due to historical management strategies focusing on wildfire suppression. Forest restoration treatments and fuels reductions, including thinning and prescribed burning, can reduce the frequency and intensity of wildfires. Extensive restoration and fuels treatment efforts are underway acr
Authors
Ryan A. Fitch, Julie M. Mueller, James Meldrum, Christopher Huber