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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 41764

Calibration of the Trinity River Stream Salmonid Simulator (S3) with extension to the Klamath River, California, 2006–17

The Trinity River is managed in two sections: (1) the upper 64-kilometer (km) “restoration reach” downstream from Lewiston Dam and (2) the 120-km lower Trinity River downstream from the restoration reach. The Stream Salmonid Simulator (S3) has been previously constructed and calibrated for the restoration reach. In this report, we extended and parameterized S3 for the 120-km section of the lower T
Authors
John M. Plumb, Russell W. Perry, Nicholas A. Som, Damon H. Goodman, Aaron C. Martin, Justin S. Alvarez, Nicholas J. Hetrick

Anticoagulant rodenticides are associated with increased stress and reduced body condition of avian scavengers in the Pacific Northwest

Anticoagulant rodenticides (AR) have been used globally to manage commensal rodents for decades. However their application has also resulted in primary, secondary, and tertiary poisoning in wildlife. Widespread exposure to ARs (primarily second generation ARs; SGARs) in raptors and avian scavengers has triggered considerable conservation concern over their potential effects on populations. To iden
Authors
Garth Herring, Collin Eagles-Smith, Jeremy A. Buck

Estimating population viability of the northern Great Plains piping plover population considering updated population structure, climate change, and intensive management

One challenge in wildlife conservation is understanding how various threats and management actions may influence long-term population viability. This is particularly evident when there is considerable uncertainty regarding population structure and vital rates. Reassessment of current knowledge and population trends is necessary for listed species to improve management actions that benefit conserva
Authors
Rose J. Swift, Michael J. Anteau, Kristen S. Ellis, Garrett J. MacDonald, Megan Ring, Mark H. Sherfy, Dustin L. Toy

Establishing big sagebrush seedlings on the Colorado Plateau

Factors such as soil type and precipitation vary across rangeland landscapes, and these factors affect restoration outcomes and ultimately mean that “one size fits all” management strategies are not effective across large, complex landscapes. Big sagebrush (Artemisia tridentata) is a foundational rangeland species that is important to wildlife habitat across the western U.S. On the Colorado Platea
Authors
Kari E. Veblen, Eric Thacker, Mark Larese-Casanova, Kyle C. Nehring, Michael C. Duniway, Colby C. Brungard

Growth, drought response, and climate-associated genomic structure in whitebark pine in the Sierra Nevada of California

Whitebark pine (Pinus albicaulis Engelm.) has experienced rapid population declines and is listed as threatened under the Endangered Species Act in the United States. Whitebark pine in the Sierra Nevada of California represents the southernmost end of the species' distribution and, like other portions of its range, faces threats from an introduced pathogen, native bark beetles, and a rapidly warmi
Authors
Phillip J. van Mantgem, Elizabeth R. Milano, Joan Dudney, Jonathan C.B. Nesmith, Amy G. Vandergast, Harold S.J. Zald

A decision-support framework for dam removal planning and its application in northern California

Dam removals are occurring more frequently with the rising cost of maintaining aging infrastructure, public safety concerns, and growing interest in river restoration. So far, most dam-removals have been unsystematic in their approach. Given the several thousand dam removals expected over the coming decades, a systematic approach to plan future dam removals holds potential for aligning and deliver
Authors
Suman Jumani, Lucy Andrews, Theodore E. Grantham, S. Kyle McKay, Jeffrey J. Duda, Jeanette K. Howard

Living with wildfire in Emigration Canyon, Utah: 2022 data report

Located in North Central Utah, Emigration Canyon is a prominent and historic canyon that runs northeast from Salt Lake City into the higher elevations of the Wasatch Mountains. The Wasatch Range is characterized by steep, rocky slopes and 26-44 millimeters of annual rainfall, both of which contribute to a high threat of wildfire. The area’s landscape is diverse with oak woodland at the lower eleva
Authors
Julia Goolsby, Hannah Brenkert-Smith, Dax Reid, James Meldrum, Patricia A. Champ, Christopher M. Barth, Colleen Donovan, Carolyn Wagner

Synergistic soil, land use, and climate influences on wind erosion on the Colorado Plateau: Implications for management

Two decades of drought in the southwestern USA are spurring concerns about increases in wind erosion, dust emissions, and associated impacts on ecosystems, agriculture, human health, and water supply. Different avenues of investigation into primary drivers of wind erosion and dust have yielded mixed results depending on the spatial and temporal sensitivity of the evidence. We monitored passive aeo
Authors
Travis W. Nauman, Seth M. Munson, Saroj Dhital, Nicholas P. Webb, Michael C. Duniway

Quality of thermal refuges influences use by the cold-intolerant Florida manatee

ABSTRACT: Thermal refuges are habitats used by species for behavioral thermoregulation. These habitats can be highly dynamic and are often influenced by fluctuations in local climate. When protected species require thermal refuges, it is necessary to identify stable and high-quality areas by evaluating species use in response to variation in thermal refuge quality. Here, we assessed behavioral the
Authors
Catherine G. Haase, Robert J. Fletcher Jr., Daniel Slone, James P. Reid, Susan M. Butler

Evidence for density-dependent effects on body composition of a large omnivore in a changing Greater Yellowstone Ecosystem

Understanding the density-dependent processes that drive population demography in a changing world is critical in ecology, yet measuring performance–density relationships in long-lived mammalian species demands long-term data, limiting scientists' ability to observe such mechanisms. We tested performance–density relationships for an opportunistic omnivore, grizzly bears (Ursus arctos, Linnaeus, 17
Authors
Andrea Corradini, Mark A. Haroldson, Francesca Cagnacci, Cecily M. Costello, Daniel D. Bjornlie, Daniel Thompson, Jeremy M. Nicholson, Kerry A. Gunther, Katharine R. Wilmot, Frank T. van Manen

Southwestern Willow Flycatcher (Empidonax traillii extimus) surveys at the city of Carlsbad Preserve, San Diego County, California—2022 data summary

Executive SummaryWe surveyed for Southwestern Willow Flycatchers (Empidonax traillii extimus; flycatcher) at five survey areas within the City of Carlsbad Preserve, Carlsbad, California, in 2022. Three flycatcher surveys were completed between May 18 and June 29, 2022. Territorial or transient flycatchers were not observed at the City of Carlsbad Preserve in 2022.
Authors
Lisa D. Allen, Barbara E. Kus

Wildlife health surveillance: Gaps, needs and opportunities

Disease emergence represent a global threat for public health, economy, and biological conservation and most of the emerging diseases have zoonotic origin from wildlife. To prevent their spread and to support the implementation of control measures, disease surveillance and reporting systems are needed, and due to globalisation, these activities should be carried at world level. To define the main
Authors
M. Delgado, N. Ferrari, A. Fanelli, S. Muset, L. Thompson, Jonathan M. Sleeman, C. LeAnn White, Daniel P. Walsh, C. Wannous, P. Tizzani