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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 41764

People need freshwater biodiversity

Freshwater biodiversity, from fish to frogs and microbes to macrophytes, provides a vast array of services to people. Mounting concerns focus on the accelerating pace of biodiversity loss and declining ecological function within freshwater ecosystems that continue to threaten these natural benefits. Here, we catalog nine fundamental ecosystem services that the biotic components of indigenous fresh
Authors
Abigail Lynch, Steven J. Cooke, Angela H. Arthington, Claudio Baigun, Lisa Bossenbroek, Chris Dickens, Ian Harrison, Ismael Kimirei, Simone D. Langhans, Karen J. Murchie, Julian Olden, Steve J. Ormerod, Margaret Owuor, Rajeev Raghavan, Michael J. Samways, Rafaela Schinegger, Subodh Sharma, Ram-Devi Tachamo-Shah, David Tickner, Denis Tweddle, Nathan Young, Sonja C. Jähnig

High resolution lidar data shed light on inter-island translocation of endangered bird species in the Hawaiian Islands

Translocation, often a management solution reserved for at-risk species, is a highly time-sensitive intervention in the face of a rapidly changing climate. The definition of abiotic and biotic habitat requirements is essential to the selection of appropriate release sites in novel environments. However, field-based approaches to gathering this information are often too time intensive, especially i
Authors
Erica M. Gallerani, Jeffrey Burgett, Nicolas R. Vaughn, Lucas Fortini, Geoffrey A. Fricker, Hanna L Mounce, Thomas W. Gillespie, Lisa H. Crampton, David Knapp, Justin M. Hite, Roy Gilb

Bayesian forecasting of disease spread with little or no local data

Rapid and targeted management actions are a prerequisite to efficiently mitigate disease outbreaks. Targeted actions, however, require accurate spatial information on disease occurrence and spread. Frequently, targeted management actions are guided by non-statistical approaches that define the affected area by a pre-determined distance surrounding a small number of disease detections. As an altern
Authors
Jonathan D Cook, David M. Williams, Daniel P. Walsh, Trevor J. Hefley

Potential effects of climate change on Emydoidea blandingii (Blanding’s turtle)

Emydoidea blandingii (Holbrook, 1838; Blanding’s turtles) are a species of medium-sized, long-lived, semiaquatic, freshwater turtles with a wide distribution across the northern and eastern United States and southern Canada. They have an annual activity cycle consisting of late autumn and winter overwintering and spring emergence, spring movement and foraging, spring and summer nesting, and summer
Authors
Marta P. Lyons, Catherine A. Nikiel, Olivia E. LeDee, Ryan Boyles

Nest attendance, incubation constancy, and onset of incubation in dabbling ducks

In birds, parents must provide their eggs with a safe thermal environment suitable for embryonic development. Species with uniparental incubation must balance time spent incubating eggs with time spent away from the nest to satisfy self-maintenance needs. Patterns of nest attendance, therefore, influence embryonic development and the time it takes for eggs to hatch. We studied nest attendance (tim
Authors
C. Alex Hartman, Josh T. Ackerman, Sarah H. Peterson, Brady Lynn Fettig, Michael L. Casazza, Mark P. Herzog

Survival, healing, and swim performance of juvenile migratory sea lamprey (Petromyzon marinus) implanted with a new acoustic microtransmitter designed for small eel-like fishes

BackgroundLittle is known about the transformer stage of the parasitic lampreys, a brief but critical period that encompasses juvenile out-migration from rivers to lakes or oceans to begin parasitic feeding. Information about this life stage could have significant conservation implications for both imperiled and invasive lampreys. We investigated tag retention, survival, wound healing, and swim pe
Authors
Taylor F. Haas, Theodore R. Castro-Santos, Scott M. Miehls, Zhiqun D. Deng, Tyler Michael Bruning, C. Michael Wagner

A bacteriological comparison of the hemolymph from healthy and moribund unionid mussel populations in the upper Midwestern U.S.A. prompts the development of diagnostic assays to detect Yokenella regensburgei

Recent bacteriological investigations of freshwater mussel mortality events in the southeastern United States have identified a variety of bacteria and differences in bacterial communities between sick and healthy mussels. In particular, Yokenella regensburgei and Aeromonas spp. have been shown to be associated with moribund mussels, although it remains unclear whether these bacteria are causes or
Authors
Eric Leis, Sara Dziki, Isaac Standish, Diane L. Waller, Jordan Richard, Jesse Weinzinger, Cleyo Harris, Susan Knowles, Tony Goldberg

Intra-specific variation in responses to habitat restoration: Could artificial reefs increase spatiotemporal segregation between migratory phenotypes of lake sturgeon?

Habitat restoration is an important tool used to conserve biodiversity and restore species, but its effects are notoriously difficult to predict. Although outcomes of restoration projects are usually assessed using indices of species abundance and diversity, phenotypic differences among individuals within species are likely associated with differing responses to restored habitats. Here, we use lak
Authors
Tyler J. Buchinger, Darryl W. Hondorp, Charles C. Krueger

Conspecific density and habitat quality affect breeding habitat selection: Support for the social attraction hypothesis

Breeding habitat selection is a critical component of the annual cycle because of its effect on fitness. Multiple theories of habitat selection can be differentiated by their responses to the quantity of habitat, conspecific density, and habitat quality. Here, we use network analysis to understand the characteristics of fine-scale breeding habitat selected by both immigrant and returning adult pip
Authors
Rose J. Swift, Michael J. Anteau, Kristen S. Ellis, Megan Ring, Mark H. Sherfy, Dustin L. Toy

Biting midges (Diptera: Ceratopogonidae) as putative vectors of zoonotic Onchocerca lupi (Nematoda: Onchocercidae) in northern Arizona and New Mexico, southwestern United States

Onchocerca lupi (Rodonaja, 1967) is an understudied, vector-borne, filarioid nematode that causes ocular onchocercosis in dogs, cats, coyotes, wolves, and is also capable of infecting humans. Onchocercosis in dogs has been reported with increasing incidence worldwide. However, despite the growing number of reports describing canine O. lupi cases as well as zoonotic infections globally, the disease
Authors
Chandler C. Roe, Olivia Holiday, Kelly Upshaw-Bia, Gaven Benally, Charles H.D. Williamson, Jennifer Urbanz, Guilherme G. Verocai, Chase Ridenour, Roxanne Nottingham, Morgan Ford, Derek Lake, Theodore Kennedy, Crystal Hepp, Jason W. Sahl

Spatial and temporal variability in summertime dissolved carbon dioxide and methane in temperate ponds and shallow lakes

Small waterbodies have potentially high greenhouse gas emissions relative to their small footprint on the landscape, although there is high uncertainty in model estimates. Scaling their carbon dioxide (CO2) and methane (CH4) exchange with the atmosphere remains challenging due to an incomplete understanding and characterization of spatial and temporal variability in CO2 and CH4. Here, we measured
Authors
Nicholas E. Ray, Meredith Holgerson, Mikkel Rene Andersen, Janis Bikse, Lauren E Bortolotti, Martyn N. Futter, Ilga Kokorite, Alan Law, Cory P. McDonald, Jorrit Mesman, Mike Peacock, David Richardson, Julien Arsenault, Sheel Bansal, Kaelin M Cawley, Kerri Finlay, McKenzie Kuhn, Amir Reza Shahabinia, Facundo Smufer

Range-wide population trend analysis for greater sage-grouse (Centrocercus urophasianus)—Updated 1960–2022

Greater sage-grouse (Centrocercus urophasianus) are at the center of state and national land-use policies largely because of their unique life-history traits as an ecological indicator for health of sagebrush ecosystems. This updated population trend analysis provides state and federal land and wildlife managers with best-available science to help guide current management and conservation plans ai
Authors
Peter S. Coates, Brian G. Prochazka, Cameron L. Aldridge, Michael S. O'Donnell, David R. Edmunds, Adrian P. Monroe, Steve E. Hanser, Lief A. Wiechman, Michael P. Chenaille