Publications
This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.
Filter Total Items: 41764
State of the science and decision support for measuring suspended sediment with acoustic instrumentation
Acoustic instrumentation can be used to provide time-series and discrete estimates of suspended-sediment concentration, load, and sediment particle sizes in fluvial systems, which are essential for creating informed solutions to many sediment-related environmental, engineering, and land management concerns. Historically, scientists have developed relations between suspended sediment characteristic
Authors
Molly S. Wood, Joel T. Groten, Timothy D. Straub, Dan R.W. Haught, Ronald E. Griffiths, Justin A. Boldt, Zulimar Lucena, Jeb E. Brown, Steven E. Suttles, Patrick J. Dickhudt
Successful detection of Delta and Omicron Variants of SARS-CoV-2 by veterinary diagnostic laboratory participants in an interlaboratory comparison exercise
BackgroundThroughout the COVID-19 pandemic, veterinary diagnostic laboratories have tested diagnostic samples for SARS-CoV-2 both in animals and over 6 million human samples. An evaluation of the performance of those laboratories is needed using blinded test samples to ensure that laboratories report reliable data to the public. This interlaboratory comparison exercise (ILC3) builds on 2 prior exe
Authors
Kaiping Deng, Sarah M. Nemser, Kirstin Frost, Laura B. Goodman, Hon S. Ip, Mary Lea Killian, Jodie Ulaszek, Shannon Kiener, Matthew Kmet, Steffen Uhlig, Karina Hettwer, Bertrand Colson, Kapil Nichani, Anja Schlierf, Andriy Tkachenko, Megan R. Miller, Ravinder Reddy, Gregory H. Tyson
Toward a national eDNA strategy for the United States
Environmental DNA (eDNA) data make it possible to measure and monitor biodiversity at unprecedented resolution and scale. As use-cases multiply and scientific consensus grows regarding the value of eDNA analysis, public agencies have an opportunity to decide how and where eDNA data fit into their mandates. Within the United States, many federal and state agencies are individually using eDNA data i
Authors
Ryan Kelly, David M. Lodge, Kai Lee, Susanna Theroux, Adam Sepulveda, Chris Scholin, Joseph M. Craine, Elizabeth Allan, Krista M. Nichols, Kim M. Parsons, Kelly D Goodwin, Zachary Gold, Francisco P. Chavez, Rachel T. Noble, Cathryn Abbott, Melinda R. Baerwald, Amanda Naaum, Peter Thielen, Ariel Simons, Christopher L. Jerde, Jeffrey J. Duda, Maggie Hunter, John Hagan, Rachel Meyer, Joshua Steele, Mark Stoeckle, Holly Bik, Christopher Meyer, Eric D. Stein, Karen James, Austen Thomas, Elif Demir-Hilton, Molly Timmers, John Griffith, Michael J Weise, Steve Weisberg
The Science Application for Risk Reduction (SAFRR) Scenario Retrospective 2006–21
The U.S. Geological Survey Science Application for Risk Reduction (SAFRR) Project has created four major hazard scenarios—ShakeOut, ARkStorm, Tsunami Scenario, and HayWired—with multidisciplinary teams of scientists, academics, and practitioners. By presenting a clear and highly detailed narrative of potential damage from earthquakes, tsunamis, and winter storms, the scenarios are intended to fost
Authors
Nora Lynn Smithhisler, Nina Burkardt
Application of electricity and underwater acoustics to clear fish from a navigation lock during maintenance
The presence of fish within navigation locks can introduce an environmental challenge for construction crews when maintenance is required. This study examined the effectiveness of a dual-deterrent fish herding technique using electricity and acoustic stimuli to reduce the abundance of fish within a navigation lock before a scheduled dewatering for maintenance. Fixed-location multi-beam imaging so
Authors
Jose Rivera, Aaron R. Cupp, Josey Lee Ridgway, Duane Chapman, Bethany E Hoster, Matthew Ross Acre, Robin Calfee, Jesse Robert Fischer, James J. Duncker
Influence of increased freshwater inflow on nitrogen and phosphorus budgets in a dynamic subtropical estuary, Barataria Basin, Louisiana
Coastal Louisiana is currently experiencing high rates of wetland loss and large-scale ecosystem restoration is being implemented. One of the largest and most novel restoration projects is a controlled sediment diversion, proposed to rebuild and sustain wetlands by diverting sediment- and nutrient-rich water from the Mississippi River. However, the impact of this proposed sediment diversion on the
Authors
Hoonshin Jung, William K. Nuttle, Melissa Millman Baustian, Tim J. B. Carruthers
Spatiotemporal patterns and environmental drivers of eastern redcedar (Juniperus virginiana) abundance along the Missouri River, USA
Context: Changes in disturbance regimes, including reductions in flooding and geomorphic dynamism from dam construction and flow regulation, have facilitated invasion by eastern redcedar (Juniperus virginiana L.), an upland tree species, in the understory of floodplain forests along the Missouri National Recreational River (MNRR).Objectives: Our aim was to determine the spatiotemporal patterns and
Authors
Nadeesha D. Illeperuma, Mark D. Dixon, Caroline M. Elliott, Kimberly I. Magnuson, Miyuraj H H. Withanage, James E. Vogelmann
Captivity, reintroductions, and the rewilding of amphibian-associated bacterial communities
Many studies have noted differences in microbes associated with animals reared in captivity compared to their wild counterparts, but few studies have examined how microbes change when animals are reintroduced to the wild after captive rearing. As captive assurance populations and reintroduction programs increase, a better understanding of how microbial symbionts respond during animal translocation
Authors
Timothy Korpita, Erin L. Muths, Mary Kay Watry, Valerie J. McKenzie
No evidence for cottonwood forest decline along a flow-augmented western U.S. river
In contrast to many other arid region rivers, streamflow in the South Platte River is heavily augmented by trans-basin water imports and irrigation return flows. Hydrological changes began in the 1880s, resulting in channel narrowing and the development of a continuous Populus-Salix forest by the mid-twentieth century. We assessed the composition, structure and regeneration status of the riparian
Authors
Cetan Christensen, Gabrielle L. Katz, J. M. Friedman, Miranda D. Redmond, Andrew S. Norton
Taming wildfires in the context of climate change: The case of the United States
This report provides a global assessment and outlook on wildfire risk in the context of climate change. It discusses the drivers behind the growing incidence of extreme wildfires and the attribution effect of climate change. It outlines the environmental, social and economic impacts of wildfires by illustrating the losses and costs observed during recent extreme wildfire events. Building on this,
Authors
Emily Ann Orzechowski, Shawn Carter
People need freshwater biodiversity: Nine reasons freshwater biodiversity is important for humans
Freshwater biodiversity, from fish to frogs and microbes to macrophytes, provides a vast array of services to people. These services are under a growing threat as human-related pressure threatens freshwater biodiversity on multiple fronts. Here, Abigail Lynch and colleagues discuss nine fundamental ecosystem services that freshwater biodiversity provide to people. Given the importance of freshwate
Authors
Abigail Lynch, Karen J. Murchie, Steven J. Cooke
User engagement testing with a pilot decision support tool aimed to support species managers
Species status assessments (SSAs) are required for endangered species by the U.S. Fish and Wildlife Service and focus on the resiliency, redundancy, and representation of endangered species. SSAs must include climate information, because climate is a factor that will impact species in the future. To aid in the inclusion of climate information, a decision support system (DSS) entitled Climate Analy
Authors
Haven J. Cashwell, Karen S. McNeal, Kathie Dello, Ryan Boyles, Corey Davis