Wesley Daniel, Ph.D.
Wesley Daniel is a Fishery Biologist at the USGS Wetland and Aquatic Research Center, and leads the USGS Nonindigenous Aquatic Species Database.
Science and Products
Filter Total Items: 33
Assessing impacts of human stressors on stream fish habitats across the Mississippi River basin
Effective conservation of stream fishes and their habitats is complicated by the fact that human stressors alter the way in which natural factors such as stream size, catchment geology, and regional climate influence stream ecosystems. Consequently, efforts to assess the condition of stream fishes and their habitats must not only attempt to characterize the effects of human stressors but...
Authors
Jared Ross, Dana M. Infante, Arthur R. Cooper, Joanna B. Whittier, Wesley M. Daniel
When are environmental DNA early detections of invasive species actionable?
Environmental DNA (eDNA) sampling provides sensitive early detection capabilities for recently introduced taxa. However, natural resource managers struggle with how to integrate eDNA results into an early detection rapid response program because positive eDNA detections are not always indicative of an eventual infestation. We used a structured decision making (SDM) framework to evaluate...
Authors
Adam Sepulveda, Christine E. Dumoulin, Denise L. Blanchette, John Mcphedran, Colin Holme, Nathan Whalen, Margaret E. Hunter, Christopher M. Merkes, Catherine A. Richter, Matthew E. Neilson, Wesley M. Daniel, Devin Nicole Jones, David R. Smith
Plant migration due to winter climate change: Range expansion of tropical invasive plants in response to warming winters
Warming winters due to climate change can facilitate the range expansion of invasive non-native species. In the southeastern United States, the frequency and intensity of extreme winter temperatures determines the northern range limits of many tropical organisms including many species of invasive non-native plants. However, the effects of winter climate change on invasive species’ range...
Authors
Michael J. Osland, Bogdan Chivoiu, Laura C. Feher, Leah Dale, Deah Lieurance, Wesley M. Daniel, Jessica E. Spencer
Community for data integration 2019 project report
The U.S. Geological Survey Community for Data Integration annually supports small projects focusing on data integration for interdisciplinary research, innovative data management, and demonstration of new technologies. This report provides a summary of the 14 projects supported in fiscal year 2019 and outlines their goals, activities, and accomplishments. Proposals in 2019 were...
Authors
Amanda N. Liford, Caitlin M. Andrews, Aparna Bamzai, Joseph A. Bard, David S. Blehert, John Bradford, Wesley M. Daniel, Sara L. Caldwell Eldridge, Frank L. Engel, Jason A. Ferrante, Amy K. Gilmer, Margaret E. Hunter, Jeanne M. Jones, Benjamin Letcher, Frances L. Lightsom, Richard R. McDonald, Leah E. Morgan, Sasha Reed, Leslie Hsu
By
Ecosystems Mission Area, Water Resources Mission Area, Science Synthesis, Analysis and Research Program, Science Analytics and Synthesis (SAS) Program, Volcano Hazards Program, Community for Data Integration (CDI), Geology, Geophysics, and Geochemistry Science Center, Geosciences and Environmental Change Science Center, National Wildlife Health Center, Oklahoma-Texas Water Science Center, Southwest Biological Science Center, Volcano Science Center, Western Geographic Science Center, Wetland and Aquatic Research Center , Woods Hole Coastal and Marine Science Center, Science Data Management
Gaining decision-maker confidence through community consensus: Developing environmental DNA standards for data display on the USGS Nonindigenous Aquatic Species database
To advance national efforts for the detection and biosurveillance of aquatic invasive species (AIS), we employed a community consensus process to enable the incorporation of environmental DNA (eDNA) detection data into the U.S. Geological Survey’s (USGS) Nonindigenous Aquatic Species (NAS) database (https://nas.er.usgs.gov/eDNA/). Our goal was to identify minimum standards and best...
Authors
Jason A. Ferrante, Wesley M. Daniel, Jonathan (Contractor) Adam Freedman, Katy E. Klymus, Matthew E. Neilson, Yale J. Passamaneck, Christopher B. Rees, Adam Sepulveda, Margaret E. Hunter
Projected stream fish community risk to climate impacts in the Northeastern and Midwestern United States
Climate change is expected to alter stream fish habitat potentially leading to changes in the composition and distribution of fish communities. In the Northeastern and Midwestern United States we identified the distribution and characteristics of those fish communities most and least at risk of experiencing changes in climate which deviate from the climate they are associated with. We...
Authors
N. Sievert, Craig P. Paukert, J. B. Whittier, Wesley M. Daniel, D.M. Infante, Jana S. Stewart
Climate matching with the climatchR R package
Climate matching allows comparisons of climatic conditions between different locations to understand location and species range climatic suitability. The approach may be used as part of horizon scanning exercises such as those conducted for invasive species. We implemented the CLIMATCH algorithm into an R package, climatchR. The package allows automated and scripted climate matching...
Authors
Richard A. Erickson, Peder S. Engelstad, Catherine S. Jarnevich, Helen Sofaer, Wesley M. Daniel
Using structured decision making to evaluate potential management responses to detection of dreissenid mussel (Dreissena spp.) environmental DNA
Environmental (e)DNA tools are sensitive and cost-effective for early detection of invasive species. However, the uncertainty associated with the interpretation of positive eDNA detections makes it challenging to determine appropriate natural resource management responses. Multiple sources of error can give rise to positive detections of eDNA in a sample when individuals of that species...
Authors
Adam Sepulveda, David R. Smith, Katy O'Donnell, Nathan Owens, Brittany White, Catherine A. Richter, Christopher M. Merkes, Skylar L. Wolf, Mike Rau, Matthew E. Neilson, Wesley M. Daniel, Christine E. Dumoulin, Margaret E. Hunter
A framework to integrate innovations in invasion science for proactive management
Invasive alien species (IAS) are a rising threat to biodiversity, national security, and regional economies, with impacts in the hundreds of billions of U.S. dollars annually. Proactive or predictive approaches guided by scientific knowledge are essential to keeping pace with growing impacts of invasions under climate change. Although the rapid development of diverse technologies and...
Authors
Charles B. van Rees, Brian K. Hand, Sean C. Carter, Charles Bargeron, Timothy Joseph Cline, Wesley M. Daniel, Jason A. Ferrante, Keith Gaddis, Margaret E. Hunter, Catherine S. Jarnevich, Melodie A. McGeoch, Jeffrey T. Morisette, Matthew E. Neilson, Helen E. Roy, Mary Ann Rozance, Adam Sepulveda, Rebekah D. Wallace, Diane C. Whited, Taylor Wilcox, John S. Kimball, Gordon Luikart
The North American Freshwater Migratory Fish Database (NAFMFD): Characterizing the migratory life histories of freshwater fishes of Canada, the United States and Mexico
AimMigratory freshwater fishes are those that must access discrete habitats to complete their life cycles. Freshwater fish migrations occur around the world and provide numerous ecosystem services for humans and natural systems; however, many migratory species are in decline globally. A limiting factor to successfully conserve freshwater migratory fishes is that the migratory life...
Authors
Emily Marie Dean, Arthur R. Cooper, Lizhu Wang, Wesley M. Daniel, Solomon R. David, Clayton Ernzen, Keith B. Gido, Edward Hale, Timothy J. Haxton, William E. Kelso, Nancy J. Léonard, Chris Lido, Joseph Margraf, Michael S. Porter, Casey A. Pennock, David L. Propst, Jared Ross, Michelle D Staudinger, Dana M. Infante, Gary Whelan
A landscape approach for identifying potential reestablishment sites for extirpated stream fishes: an example with Arctic grayling (Thymallus arcticus) in Michigan
Habitat degradation combined with climate change increases the threat of extinction for stream fishes. In response to these threats, efforts to reestablish species within formerly occupied streams or translocation to suitable areas may be effective conservation strategies. In the absence of historic species presence data, identifying locations where suitable habitat exists across many...
Authors
Ralph William Tingley, Dana M. Infante, Emily Marie Dean, Douglas W. Schemske, Arthur R. Cooper, Jared Ross, Wesley M. Daniel
Using fish community and population indicators to assess the biological condition of streams and rivers of the Chesapeake Bay watershed, USA
The development of indicators to assess relative freshwater condition is critical for management and conservation. Predictive modeling can enhance the utility of indicators by providing estimates of condition for unsurveyed locations. Such approaches grant understanding of where “good” and “poor” conditions occur and provide insight into landscape contexts supporting such conditions...
Authors
Kelly O. Maloney, Kevin P. Krause, Matthew J. Cashman, Wesley M. Daniel, Benjamin Paul Gressler, Daniel J. Wieferich, John A. Young
Filter Total Items: 23
An Assessment of Invasive Species Range Shifts in the Southeastern U.S. and Actions to Manage Them
Species are on the move as they respond to climate change. This includes many native species, but also species with high costs to society such as disease vectors, pests, and nonnative invasive species (an invasive species is a species that is not native to a specific location but is spreading with the tendency of causing damage to native plants and animals). Currently there are hundreds...
Establishing standards and integrating environmental DNA (eDNA) data into the USGS Nonindigenous Aquatic Species database
Environmental DNA (eDNA) testing allows for high sensitivity monitoring efforts of cryptic species in large, remote systems and is performed by investigating water and soil samples for sloughed DNA. Having access to eDNA datasets across multiple taxa and ecosystems is necessary for improved coordination among researchers and management. Additionally, quality control protocols are needed...
National Public Screening Tool for Invasive and Non-native Aquatic Species Data
Identifying the leading edge of a biological invasion can be difficult. Many management and research entities have biological samples or surveys that may unknowingly contain data on nonindigenous species. The new Nonindigenous Aquatic Species (NAS) Database automated online tool “SEINeD” (Screen and Evaluate Invasive and Non-native Data) will allow a user to search for these...
The Nonindigenous Aquatic Species Alert Risk Mapper (ARM)
The Nonindigenous Aquatic Species (NAS) program has developed a new tool, the NAS Alert Risk Mapper (ARM), to characterize waterbodies in the conterminous U.S. and Hawaii at potential risk of invasion from a new nonindigenous species sighting.
Defining Native Ranges of U.S. Inland Fishes
Understanding the native versus non-native range of a species can provide useful information about dispersal, population distribution patterns, and human mediated movement across hydrologic barriers. The USGS Nonindigenous Aquatic Species (NAS) Program is working with partners to define native ranges of inland fishes in the United States to help identify which species should be included in the NAS...
The Nonindigenous Aquatic Species Flood and Storm Tracker (FaST)
Storm-related flooding can lead to the potential spread of nonindigenous (or non-native) aquatic species into waterways they have not been seen in before. The USGS Nonindigenous Aquatic Species program has developed an innovative mapping tool to help natural resource managers with post-storm nonindigenous aquatic species detection and assessment efforts.
Knowledge Extraction Algorithms (KEA): Turning Literature Into Data
Identifying, extracting, and mobilizing information from current and historical literature is a time-consuming part of organizing and collating synthetic data productions. This project explored the use of algorithm-based methods to identify and extract occurrence information from the GeoDeepDive (GDD) literature database to support upkeep of the Nonindigenous Aquatic Species (NAS) data...
National Alert Risk Mapper for Nonindigenous Aquatic Species
The Nonindigenous Aquatic Species (NAS) Database and Alert System (https://nas.er.usgs.gov/default.aspx) provides a framework for the rapid dissemination of new invasions as they are incorporated into the NAS Database. The system notifies registered users of new sightings of >1,330 non-native aquatic species as part of national-scale early detection and rapid response systems (EDRR), and...
Lionfish Distribution, Geographic Spread, Biology, and Ecology
Many aspects of lionfish biology are studied at the USGS Wetland and Aquatic Research Center. As part of the U.S. Geological Survey Nonindigenous Aquatic Species database, the distribution of lionfish is tracked over time.
Great Lakes Aquatic Nuisance Species Information System
The Great Lakes Aquatic Nuisance Species Information System (GLANSIS) was developed by the NOAA Great Lakes Science Center to monitor nonindigenous aquatic species introductions into the Great Lakes region.
Nonindigenous Aquatic Species Database and Website (NAS)
Nonindigenous - non-native - species threaten biodiversity, but the distribution of these species is not well-known. The Nonindigenous Aquatic Species (NAS) database tracks occurrence data on non-native aquatic plant and animal species throughout the United States, and provides the public with species profiles, distribution maps, and online/real-time queries for state/hydrologic basin- specific...
Filter Total Items: 22
Nonindigenous aquatic species and potential spread after Hurricane Nate
This map was created to help assess impacts on nonindigenous aquatic species distributions due to flooding associated with Hurricane Nate. Storm surge and flood events can assist expansion and distribution of nonindigenous aquatic species through the connection of adjacent watersheds, backflow of water upstream of impoundments, increased downstream flow, and creation of freshwater...
Nonindigenous aquatic species and potential spread after Hurricane Irma
This map was created to help assess impacts on nonindigenous aquatic species distributions due to flooding associated with Hurricane Irma. Storm surge and flood events can assist expansion and distribution of nonindigenous aquatic species through the connection of adjacent watersheds, backflow of water upstream of impoundments, increased downstream flow, and creation of freshwater...
Nonindigenous aquatic species and potential spread after Hurricane Maria
This map was created to help assess impacts on nonindigenous aquatic species distributions due to flooding associated with Hurricane Maria. Storm surge and flood events can assist expansion and distribution of nonindigenous aquatic species through the connection of adjacent watersheds, backflow of water upstream of impoundments, increased downstream flow, and creation of freshwater...
National Fish Habitat Partnership (NFHP) 2015 Anthropogenic Disturbance Data for the Conterminous United States linked to the NHDPLUSV1
This CSV file contains landscape factors representing anthropogenic disturbances to stream habitats summarized within local and network stream catchments of Southeast Alaska. The source datasets compiled and attributed to spatial units were identified as being: (1) meaningful for assessing fluvial fish habitat; (2) consistent across the entire study area in the way that they were...
National Fish Habitat Partnership (NFHP) 90 Meter Buffers of the NHDPlusV1 for the Conterminous United States
This geodatabase contains 90 meter buffers of streams within the National Hydrography Dataset Plus Version 1 (NHDPlusV1). These buffers were developed by converting NHDPlusV1 flowlines to a 30m grid, then running a euclidean allocation function in ArcPy to generate buffer zones. For flowlines representing artificial paths within NHD area river polygons, buffers extend from the outside...
National Fish Habitat Partnership (NFHP) 2015 Cumulative Habitat Condition Indices with Limiting and Severe Disturbances for the Conterminous United States linked to NHDPlusV1 v2.0
This CSV file contains cumulative fish habitat condition index (HCI) scores generated for river reaches of the conterminous United States as well as indices generated specifically for four spatial units including local and network catchments and 90 m local and network buffers of river reaches. Note that the cumulative HCI score is determined from limiting index scores generated for the...
National Fish Habitat Partnership (NFHP) 2015 Human Disturbance Data for Alaska linked to HUC12 watersheds
This CSV file contains landscape factors representing anthropogenic disturbances to stream habitats summarized within 6th level Hydrologic Unit Code (HUC12) watersheds of the Watershed Boundary Dataset. The source datasets compiled and attributed to spatial units were identified as being: (1) meaningful for assessing fluvial fish habitat; (2) consistent across the entire study area in...
National Fish Habitat Partnership (NFHP) 2015 Human Disturbance Data for Hawaii
This CSV file contains landscape factors representing anthropogenic disturbances to stream habitats summarized within local and network stream catchments as well as the downstream main channel catchment perennial and intermittent stream reaches of the five main islands of Hawai'i. The source datasets compiled and attributed to spatial units were identified as being: (1) meaningful for...
National Fish Habitat Partnership (NFHP) 2015 Cumulative Habitat Condition Scores and Disturbance Indices Linked to Catchments of Southeast Alaska
This shapefile contains cumulative fish habitat condition index (HCI) scores as well as specific disturbance indices for local and network catchments of Southeast Alaska. Catchments were created in support of Jared Ross's Masters thesis. The source datasets compiled and attributed to spatial units were identified as being: (1) meaningful for assessing fluvial fish habitat; (2) consistent...
National Fish Habitat Partnership (NFHP) 2015 Cumulative Habitat Condition Scores and Disturbance Indices for Hawaii Linked to Catchments of the Hawai'i Fish Habitat Partnership Stream Layer
This shapefile contains cumulative fish habitat condition index (HCI) scores and specific disturbance indices for local and network stream catchments as well as the downstream main channel catchment of perennial and intermittent streams reaches of the five main island of Hawaii. In this dataset indices are linked to the Hawaii Fish Habitat Partnership (HFHP) stream layer (Tingley et al...
Science and Products
Filter Total Items: 33
Assessing impacts of human stressors on stream fish habitats across the Mississippi River basin
Effective conservation of stream fishes and their habitats is complicated by the fact that human stressors alter the way in which natural factors such as stream size, catchment geology, and regional climate influence stream ecosystems. Consequently, efforts to assess the condition of stream fishes and their habitats must not only attempt to characterize the effects of human stressors but...
Authors
Jared Ross, Dana M. Infante, Arthur R. Cooper, Joanna B. Whittier, Wesley M. Daniel
When are environmental DNA early detections of invasive species actionable?
Environmental DNA (eDNA) sampling provides sensitive early detection capabilities for recently introduced taxa. However, natural resource managers struggle with how to integrate eDNA results into an early detection rapid response program because positive eDNA detections are not always indicative of an eventual infestation. We used a structured decision making (SDM) framework to evaluate...
Authors
Adam Sepulveda, Christine E. Dumoulin, Denise L. Blanchette, John Mcphedran, Colin Holme, Nathan Whalen, Margaret E. Hunter, Christopher M. Merkes, Catherine A. Richter, Matthew E. Neilson, Wesley M. Daniel, Devin Nicole Jones, David R. Smith
Plant migration due to winter climate change: Range expansion of tropical invasive plants in response to warming winters
Warming winters due to climate change can facilitate the range expansion of invasive non-native species. In the southeastern United States, the frequency and intensity of extreme winter temperatures determines the northern range limits of many tropical organisms including many species of invasive non-native plants. However, the effects of winter climate change on invasive species’ range...
Authors
Michael J. Osland, Bogdan Chivoiu, Laura C. Feher, Leah Dale, Deah Lieurance, Wesley M. Daniel, Jessica E. Spencer
Community for data integration 2019 project report
The U.S. Geological Survey Community for Data Integration annually supports small projects focusing on data integration for interdisciplinary research, innovative data management, and demonstration of new technologies. This report provides a summary of the 14 projects supported in fiscal year 2019 and outlines their goals, activities, and accomplishments. Proposals in 2019 were...
Authors
Amanda N. Liford, Caitlin M. Andrews, Aparna Bamzai, Joseph A. Bard, David S. Blehert, John Bradford, Wesley M. Daniel, Sara L. Caldwell Eldridge, Frank L. Engel, Jason A. Ferrante, Amy K. Gilmer, Margaret E. Hunter, Jeanne M. Jones, Benjamin Letcher, Frances L. Lightsom, Richard R. McDonald, Leah E. Morgan, Sasha Reed, Leslie Hsu
By
Ecosystems Mission Area, Water Resources Mission Area, Science Synthesis, Analysis and Research Program, Science Analytics and Synthesis (SAS) Program, Volcano Hazards Program, Community for Data Integration (CDI), Geology, Geophysics, and Geochemistry Science Center, Geosciences and Environmental Change Science Center, National Wildlife Health Center, Oklahoma-Texas Water Science Center, Southwest Biological Science Center, Volcano Science Center, Western Geographic Science Center, Wetland and Aquatic Research Center , Woods Hole Coastal and Marine Science Center, Science Data Management
Gaining decision-maker confidence through community consensus: Developing environmental DNA standards for data display on the USGS Nonindigenous Aquatic Species database
To advance national efforts for the detection and biosurveillance of aquatic invasive species (AIS), we employed a community consensus process to enable the incorporation of environmental DNA (eDNA) detection data into the U.S. Geological Survey’s (USGS) Nonindigenous Aquatic Species (NAS) database (https://nas.er.usgs.gov/eDNA/). Our goal was to identify minimum standards and best...
Authors
Jason A. Ferrante, Wesley M. Daniel, Jonathan (Contractor) Adam Freedman, Katy E. Klymus, Matthew E. Neilson, Yale J. Passamaneck, Christopher B. Rees, Adam Sepulveda, Margaret E. Hunter
Projected stream fish community risk to climate impacts in the Northeastern and Midwestern United States
Climate change is expected to alter stream fish habitat potentially leading to changes in the composition and distribution of fish communities. In the Northeastern and Midwestern United States we identified the distribution and characteristics of those fish communities most and least at risk of experiencing changes in climate which deviate from the climate they are associated with. We...
Authors
N. Sievert, Craig P. Paukert, J. B. Whittier, Wesley M. Daniel, D.M. Infante, Jana S. Stewart
Climate matching with the climatchR R package
Climate matching allows comparisons of climatic conditions between different locations to understand location and species range climatic suitability. The approach may be used as part of horizon scanning exercises such as those conducted for invasive species. We implemented the CLIMATCH algorithm into an R package, climatchR. The package allows automated and scripted climate matching...
Authors
Richard A. Erickson, Peder S. Engelstad, Catherine S. Jarnevich, Helen Sofaer, Wesley M. Daniel
Using structured decision making to evaluate potential management responses to detection of dreissenid mussel (Dreissena spp.) environmental DNA
Environmental (e)DNA tools are sensitive and cost-effective for early detection of invasive species. However, the uncertainty associated with the interpretation of positive eDNA detections makes it challenging to determine appropriate natural resource management responses. Multiple sources of error can give rise to positive detections of eDNA in a sample when individuals of that species...
Authors
Adam Sepulveda, David R. Smith, Katy O'Donnell, Nathan Owens, Brittany White, Catherine A. Richter, Christopher M. Merkes, Skylar L. Wolf, Mike Rau, Matthew E. Neilson, Wesley M. Daniel, Christine E. Dumoulin, Margaret E. Hunter
A framework to integrate innovations in invasion science for proactive management
Invasive alien species (IAS) are a rising threat to biodiversity, national security, and regional economies, with impacts in the hundreds of billions of U.S. dollars annually. Proactive or predictive approaches guided by scientific knowledge are essential to keeping pace with growing impacts of invasions under climate change. Although the rapid development of diverse technologies and...
Authors
Charles B. van Rees, Brian K. Hand, Sean C. Carter, Charles Bargeron, Timothy Joseph Cline, Wesley M. Daniel, Jason A. Ferrante, Keith Gaddis, Margaret E. Hunter, Catherine S. Jarnevich, Melodie A. McGeoch, Jeffrey T. Morisette, Matthew E. Neilson, Helen E. Roy, Mary Ann Rozance, Adam Sepulveda, Rebekah D. Wallace, Diane C. Whited, Taylor Wilcox, John S. Kimball, Gordon Luikart
The North American Freshwater Migratory Fish Database (NAFMFD): Characterizing the migratory life histories of freshwater fishes of Canada, the United States and Mexico
AimMigratory freshwater fishes are those that must access discrete habitats to complete their life cycles. Freshwater fish migrations occur around the world and provide numerous ecosystem services for humans and natural systems; however, many migratory species are in decline globally. A limiting factor to successfully conserve freshwater migratory fishes is that the migratory life...
Authors
Emily Marie Dean, Arthur R. Cooper, Lizhu Wang, Wesley M. Daniel, Solomon R. David, Clayton Ernzen, Keith B. Gido, Edward Hale, Timothy J. Haxton, William E. Kelso, Nancy J. Léonard, Chris Lido, Joseph Margraf, Michael S. Porter, Casey A. Pennock, David L. Propst, Jared Ross, Michelle D Staudinger, Dana M. Infante, Gary Whelan
A landscape approach for identifying potential reestablishment sites for extirpated stream fishes: an example with Arctic grayling (Thymallus arcticus) in Michigan
Habitat degradation combined with climate change increases the threat of extinction for stream fishes. In response to these threats, efforts to reestablish species within formerly occupied streams or translocation to suitable areas may be effective conservation strategies. In the absence of historic species presence data, identifying locations where suitable habitat exists across many...
Authors
Ralph William Tingley, Dana M. Infante, Emily Marie Dean, Douglas W. Schemske, Arthur R. Cooper, Jared Ross, Wesley M. Daniel
Using fish community and population indicators to assess the biological condition of streams and rivers of the Chesapeake Bay watershed, USA
The development of indicators to assess relative freshwater condition is critical for management and conservation. Predictive modeling can enhance the utility of indicators by providing estimates of condition for unsurveyed locations. Such approaches grant understanding of where “good” and “poor” conditions occur and provide insight into landscape contexts supporting such conditions...
Authors
Kelly O. Maloney, Kevin P. Krause, Matthew J. Cashman, Wesley M. Daniel, Benjamin Paul Gressler, Daniel J. Wieferich, John A. Young
Filter Total Items: 23
An Assessment of Invasive Species Range Shifts in the Southeastern U.S. and Actions to Manage Them
Species are on the move as they respond to climate change. This includes many native species, but also species with high costs to society such as disease vectors, pests, and nonnative invasive species (an invasive species is a species that is not native to a specific location but is spreading with the tendency of causing damage to native plants and animals). Currently there are hundreds...
Establishing standards and integrating environmental DNA (eDNA) data into the USGS Nonindigenous Aquatic Species database
Environmental DNA (eDNA) testing allows for high sensitivity monitoring efforts of cryptic species in large, remote systems and is performed by investigating water and soil samples for sloughed DNA. Having access to eDNA datasets across multiple taxa and ecosystems is necessary for improved coordination among researchers and management. Additionally, quality control protocols are needed...
National Public Screening Tool for Invasive and Non-native Aquatic Species Data
Identifying the leading edge of a biological invasion can be difficult. Many management and research entities have biological samples or surveys that may unknowingly contain data on nonindigenous species. The new Nonindigenous Aquatic Species (NAS) Database automated online tool “SEINeD” (Screen and Evaluate Invasive and Non-native Data) will allow a user to search for these...
The Nonindigenous Aquatic Species Alert Risk Mapper (ARM)
The Nonindigenous Aquatic Species (NAS) program has developed a new tool, the NAS Alert Risk Mapper (ARM), to characterize waterbodies in the conterminous U.S. and Hawaii at potential risk of invasion from a new nonindigenous species sighting.
Defining Native Ranges of U.S. Inland Fishes
Understanding the native versus non-native range of a species can provide useful information about dispersal, population distribution patterns, and human mediated movement across hydrologic barriers. The USGS Nonindigenous Aquatic Species (NAS) Program is working with partners to define native ranges of inland fishes in the United States to help identify which species should be included in the NAS...
The Nonindigenous Aquatic Species Flood and Storm Tracker (FaST)
Storm-related flooding can lead to the potential spread of nonindigenous (or non-native) aquatic species into waterways they have not been seen in before. The USGS Nonindigenous Aquatic Species program has developed an innovative mapping tool to help natural resource managers with post-storm nonindigenous aquatic species detection and assessment efforts.
Knowledge Extraction Algorithms (KEA): Turning Literature Into Data
Identifying, extracting, and mobilizing information from current and historical literature is a time-consuming part of organizing and collating synthetic data productions. This project explored the use of algorithm-based methods to identify and extract occurrence information from the GeoDeepDive (GDD) literature database to support upkeep of the Nonindigenous Aquatic Species (NAS) data...
National Alert Risk Mapper for Nonindigenous Aquatic Species
The Nonindigenous Aquatic Species (NAS) Database and Alert System (https://nas.er.usgs.gov/default.aspx) provides a framework for the rapid dissemination of new invasions as they are incorporated into the NAS Database. The system notifies registered users of new sightings of >1,330 non-native aquatic species as part of national-scale early detection and rapid response systems (EDRR), and...
Lionfish Distribution, Geographic Spread, Biology, and Ecology
Many aspects of lionfish biology are studied at the USGS Wetland and Aquatic Research Center. As part of the U.S. Geological Survey Nonindigenous Aquatic Species database, the distribution of lionfish is tracked over time.
Great Lakes Aquatic Nuisance Species Information System
The Great Lakes Aquatic Nuisance Species Information System (GLANSIS) was developed by the NOAA Great Lakes Science Center to monitor nonindigenous aquatic species introductions into the Great Lakes region.
Nonindigenous Aquatic Species Database and Website (NAS)
Nonindigenous - non-native - species threaten biodiversity, but the distribution of these species is not well-known. The Nonindigenous Aquatic Species (NAS) database tracks occurrence data on non-native aquatic plant and animal species throughout the United States, and provides the public with species profiles, distribution maps, and online/real-time queries for state/hydrologic basin- specific...
Filter Total Items: 22
Nonindigenous aquatic species and potential spread after Hurricane Nate
This map was created to help assess impacts on nonindigenous aquatic species distributions due to flooding associated with Hurricane Nate. Storm surge and flood events can assist expansion and distribution of nonindigenous aquatic species through the connection of adjacent watersheds, backflow of water upstream of impoundments, increased downstream flow, and creation of freshwater...
Nonindigenous aquatic species and potential spread after Hurricane Irma
This map was created to help assess impacts on nonindigenous aquatic species distributions due to flooding associated with Hurricane Irma. Storm surge and flood events can assist expansion and distribution of nonindigenous aquatic species through the connection of adjacent watersheds, backflow of water upstream of impoundments, increased downstream flow, and creation of freshwater...
Nonindigenous aquatic species and potential spread after Hurricane Maria
This map was created to help assess impacts on nonindigenous aquatic species distributions due to flooding associated with Hurricane Maria. Storm surge and flood events can assist expansion and distribution of nonindigenous aquatic species through the connection of adjacent watersheds, backflow of water upstream of impoundments, increased downstream flow, and creation of freshwater...
National Fish Habitat Partnership (NFHP) 2015 Anthropogenic Disturbance Data for the Conterminous United States linked to the NHDPLUSV1
This CSV file contains landscape factors representing anthropogenic disturbances to stream habitats summarized within local and network stream catchments of Southeast Alaska. The source datasets compiled and attributed to spatial units were identified as being: (1) meaningful for assessing fluvial fish habitat; (2) consistent across the entire study area in the way that they were...
National Fish Habitat Partnership (NFHP) 90 Meter Buffers of the NHDPlusV1 for the Conterminous United States
This geodatabase contains 90 meter buffers of streams within the National Hydrography Dataset Plus Version 1 (NHDPlusV1). These buffers were developed by converting NHDPlusV1 flowlines to a 30m grid, then running a euclidean allocation function in ArcPy to generate buffer zones. For flowlines representing artificial paths within NHD area river polygons, buffers extend from the outside...
National Fish Habitat Partnership (NFHP) 2015 Cumulative Habitat Condition Indices with Limiting and Severe Disturbances for the Conterminous United States linked to NHDPlusV1 v2.0
This CSV file contains cumulative fish habitat condition index (HCI) scores generated for river reaches of the conterminous United States as well as indices generated specifically for four spatial units including local and network catchments and 90 m local and network buffers of river reaches. Note that the cumulative HCI score is determined from limiting index scores generated for the...
National Fish Habitat Partnership (NFHP) 2015 Human Disturbance Data for Alaska linked to HUC12 watersheds
This CSV file contains landscape factors representing anthropogenic disturbances to stream habitats summarized within 6th level Hydrologic Unit Code (HUC12) watersheds of the Watershed Boundary Dataset. The source datasets compiled and attributed to spatial units were identified as being: (1) meaningful for assessing fluvial fish habitat; (2) consistent across the entire study area in...
National Fish Habitat Partnership (NFHP) 2015 Human Disturbance Data for Hawaii
This CSV file contains landscape factors representing anthropogenic disturbances to stream habitats summarized within local and network stream catchments as well as the downstream main channel catchment perennial and intermittent stream reaches of the five main islands of Hawai'i. The source datasets compiled and attributed to spatial units were identified as being: (1) meaningful for...
National Fish Habitat Partnership (NFHP) 2015 Cumulative Habitat Condition Scores and Disturbance Indices Linked to Catchments of Southeast Alaska
This shapefile contains cumulative fish habitat condition index (HCI) scores as well as specific disturbance indices for local and network catchments of Southeast Alaska. Catchments were created in support of Jared Ross's Masters thesis. The source datasets compiled and attributed to spatial units were identified as being: (1) meaningful for assessing fluvial fish habitat; (2) consistent...
National Fish Habitat Partnership (NFHP) 2015 Cumulative Habitat Condition Scores and Disturbance Indices for Hawaii Linked to Catchments of the Hawai'i Fish Habitat Partnership Stream Layer
This shapefile contains cumulative fish habitat condition index (HCI) scores and specific disturbance indices for local and network stream catchments as well as the downstream main channel catchment of perennial and intermittent streams reaches of the five main island of Hawaii. In this dataset indices are linked to the Hawaii Fish Habitat Partnership (HFHP) stream layer (Tingley et al...