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Software

An official USGS software project is code reviewed and approved at the bureau-level for distribution.

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Applying Simulated Treatments to Bat Populations Experiencing Severe White-nose Syndrome Mortality

We developed a model allowing for the application of treatment strategies to bat populations at risk of severe mortality from WNS. The model allows the bat population to exist within a network of hibernacula and updates survival, reproduction, movement, treatment applications, and treatment related disturbance annually. For simplicity, the effects of WNS are experienced across all hibernacula on t

grsg_lekdb: Compiling and standardizing greater sage-grouse lek databases, version 1.1.0

Greater sage-grouse (Centrocercus urophasianus) are landscape-scale sagebrush obligate species and an important gamebird and iconic species of the western United States. They occupy the sagebrush biome in western North America, extending east of the Sierra Nevada/Cascade Mountain ranges to the western regions of the Great Plains of the United States. Sage-grouse are one of the most closely monitor

USGS Model Catalog intake repository

This project contains the repository component of a modular catalog implementation.

xstrm_local

This Python package is intended to assist with summarization of landscape information to stream watershed drainages (local summaries). Methods are built in a generalized way and are intended to support efforts for any stream network having polygon based drainage watersheds. The output of these methods can be used to calculate stream network summaries using xstrm.

lcp_centrality: Defining least-cost paths and graph theory centrality measures

We present software that creates least-cost path spanning trees, a least-cost path minimum spanning tree, and graph theory centrality measures. The software was developed to support identification of population structures--specifically, greater sage-grouse (Centrocercus urophasianus), but also support other species or graph theory applications where least-cost paths are desired. We used habitat pa

North American Bat Monitoring Program: NABat Acoustic ML, Version 1.0.1

Bats play crucial ecological roles, and provide valuable ecosystem services, yet many populations face serious threats from various ecological disturbances. The North American Bat Monitoring Program (NABat) aims to assess status and trends of bat populations, while developing innovative and community-driven conservation solutions using its unique data and technology infrastructure. To support scal

wqReport

This is an R-package designed to create water-quality reports for either U.S. Fish and Wildlife Service (FWS) wildlife refuge boundaries, or user-specified Hydrologic Unit Code (HUC) boundaries (8 or 10 digit HUC services are available). Functions are included to take the user's geographical request, and find the sites that measure water-quality parameters, and retrieve that data. A workflow walks

Code Release for USGS Chesapeake Bay Studies - Data Catalog Application

Code and associated files hosted on USGS GitLab which support the USGS Chesapeake Bay Studies Data Catalog Application available at https://rconnect.usgs.gov/ChesapeakeBayDataCatalog/.

neic-traveltime

Seismic travel-time lookup package utilized by the US Geological Survey National Earthquake Information Center.

MTH5: an archivable and exchangeable HDF5 format for magnetotelluric data

MTH5 is an exchangeable and archivable format for magnetotelluric time series to better serve the community through FAIR principles. MTH5 is an HDF5 data container for magnetotelluric time series data, but could be extended to other data types. This open-source Python package provides tools for reading/writing/manipulating MTH5 files.

MT-metadata: Open-source Python package to work with magnetotelluric metadata

An open-source Python package to make reading/writing/editing magnetotelluric metadata easier.

Did You Feel It?

Did You Feel It? (DYFI) collects information from people who felt an earthquake and creates maps that show what people experienced and the extent of damage.